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謝辞の記載についてAcknowledgement remarks

雑誌論文Papers

Jinta Asami, Jae-Hyun Park, Yayoi Nomura, Chisa Kobayashi, Junki Mifune, Naito Ishimoto, Tomoko Uemura, Kehong Liu, Yumi Sato, Zhikuan Zhang, Masamichi Muramatsu, Takaji Wakita, David Drew, So Iwata, Toshiyuki Shimizu, Koichi Watashi, Sam-Yong Park, Norimichi Nomura, Umeharu Ohto
Structural basis of hepatitis B virus receptor binding
Nature Structural & Molecular Biology , 31 (2024)
DOI: 10.1038/s41594-023-01191-5
プレスリリース:
A01: A01 So Iwata A01 Norimichi Nomura A01 Sam-Yong Park
*Maestre-Reyna M, Wang PH, Nango E, Hosokawa Y, Saft M, Furrer A, Yang CH, Gusti Ngurah Putu EP, Wu WJ, Emmerich HJ, Caramello N, Franz-Badur S, Yang C, Engilberge S, Wranik M, Glover HL, Weinert T, Wu HY, Lee CC, Huang WC, Huang KF, Chang YK, Liao JH, Weng JH, Gad W, Chang CW, Pang AH, Yang KC, Lin WT, Chang YC, Gashi D, Beale E, Ozerov D, Nass K, Knopp G, Johnson PJM, Cirelli C, Milne C, Bacellar C, Sugahara M, Owada S, Joti Y, Yamashita A, Tanaka R, Tanaka T, Luo F, Tono K, Zarzycka W, Muller P, Alahmad MA, Bezold F, Fuchs V, Gnau P, Kiontke S, Korf L, Reithofer V, Rosner CJ, Seiler EM, Watad M, Werel L, Spadaccini R, Yamamoto J, Iwata S, Zhong D, Standfuss J, Royant A, *Bessho Y, *Essen LO, *Tsai MD.
Visualizing the DNA repair process by a photolyase at atomic resolution.
J Science , 382 , 6674 , eadd7795 (2023)
DOI: https://doi.org/10.1126/science.add7795
プレスリリース: https://www.riken.jp/press/2023/20231201_2/index.html
A01: B01: A01 So Iwata A01 Yoshitaka Bessho B01 Eriko Nango B01 Sigeki Owada
Han Ba Bui, Satoshi Watanabe, Norimichi Nomura, Kehong Liu, Tomoko Uemura, Michio Inoue, Akihisa Tsutsumi, Hiroyuki Fujita, Kengo Kinoshita, Yukinari Kato, So Iwata, Masahide Kikkawa, Kenji Inaba
Cryo-EM structures of human zinc transporter ZnT7 reveal the mechanism of Zn2+ uptake into the Golgi apparatus
Nature Communications , 14 , 4770 (2023)
DOI: 10.1038/s41467-023-40521-5
A01: A01 So Iwata A01 Norimichi Nomura
Titouan Jaunet-Lahary, Tatsuro Shimamura, Masahiro Hayashi, Norimichi Nomura, Kouta Hirasawa, Tetsuya Shimizu, Masao Yamashita, Naotaka Tsutsumi, Yuta Suehiro, Keiichi Kojima, Yuki Sudo, Takashi Tamura, Hiroko Iwanari, Takao Hamakubo, So Iwata, Kei-ichi Okazaki, Teruhisa Hirai, Atsuko Yamashita
Structure and mechanism of oxalate transporter OxlT in an oxalate-degrading bacterium in the gut microbiota
Nature Communications , 14 , 1730 (2023)
DOI: https://doi.org/10.1038/s41467-023-36883-5
A01: A01 So Iwata A01 Norimichi Nomura
Muna Al-Habsi, Kenji Chamoto, Ken Matsumoto, Norimichi Nomura, Baihao Zhang, Yuki Sugiura, Kazuhiro Sonomura, Aprilia Maharani, Yuka Nakajima, Yibo Wu, Yayoi Nomura, Rosemary Menzies, Masaki Tajima, Koji Kitaoka, Yasuharu Haku, Sara Delghandi, Keiko Yurimoto, Fumihiko Matsuda, So Iwata, Toshihiko Ogura, Sidonia Fagarasan, Tasuku Honjo
Spermidine activates mitochondrial trifunctional protein and improves antitumor immunity in mice
Science , 378 , 6618 , eabj3510 (2022)
DOI: 10.1126/science.abj3510
A01: A01 So Iwata A01 Norimichi Nomura
Ryoji Suno, Yukihiko Sugita, Kazushi Morimoto, Hiroko Takazaki, Hirokazu Tsujimoto, Mika Hirose, Chiyo Suno-Ikeda, Norimichi Nomura, Tomoya Hino, Asuka Inoue, Kenji Iwasaki, Takayuki Kato, So Iwata, Takuya Kobayashi
Structural insights into the G protein selectivity revealed by the human EP3-Gi signaling complex
Cell Reports , 40 , 11 , 111323 (2022)
DOI: 10.1016/j.celrep.2022.111323
プレスリリース:
A01: A01 So Iwata A01 Norimichi Nomura A01 Tomoya Hino
Zhikuan Zhang, Norimichi Nomura, Yukiko Muramoto, Toru Ekimoto, Tomoko Uemura, Kehong Liu, Moeko Yui, Nozomu Kono, Junken Aoki, Mitsunori Ikeguchi, Takeshi Noda, So Iwata, Umeharu Ohto, Toshiyuki Shimizu
Structure of SARS-CoV-2 membrane protein essential for virus assembly
Nature Communications , 13 , 4399 (2022)
DOI: 10.1038/s41467-022-32019-3
プレスリリース:
A01: A01 So Iwata A01 Norimichi Nomura
Jinta Asami, Kanako Terakado Kimura, Yoko Fujita-Fujiharu, Hanako Ishida, Zhikuan Zhang, Yayoi Nomura, Kehong Liu, Tomoko Uemura, Yumi Sato, Masatsugu Ono, Masaki Yamamoto, Takeshi Noda, Hideki Shigematsu, David Drew, So Iwata, Toshiyuki Shimizu, Norimichi Nomura, Umeharu Ohto
Structure of the bile acid transporter and HBV receptor NTCP
Nature , 606 , 7916 , 1021 (1026)
DOI: https://doi.org/10.1038/s41586-022-04845-4
A01: B01: A01 So Iwata A01 Norimichi Nomura B01 Masaki Yamamoto
Jae-Hyun Park, Masashi Iwamoto, Ji-Hye Yun, Tomomi Uchikubo-Kamo, Donghwan Son, Zeyu Jin, Hisashi Yoshida, Mio Ohki, Naito Ishimoto, Kenji Mizutani, Mizuki Oshima, Masamichi Muramatsu, Takaji Wakita, Mikako Shirouzu, Kehong Liu, Tomoko Uemura, Norimichi Nomura, So Iwata, Koichi Watashi, Jeremy R. H. Tame, Tomohiro Nishizawa, Weontae Lee, Sam-Yong Park
Structural insights into the HBV receptor and bile acid transporter NTCP
Nature , 606 , 7916 , 1027-1031 (2022)
DOI: https://doi.org/10.1038/s41586-022-04857-0
プレスリリース: https://www.yokohama-cu.ac.jp/news/2022/20220518parksamyong.html
A01: A01 So Iwata A01 Norimichi Nomura A01 Sam-Yong Park
Hosaka T, Nomura T, Kubo M, Nakane T, Fangjia L, Sekine SI, Ito T, Murayama K, Ihara K, Ehara H, Kashiwagi K, Katsura K, Akasaka R, Hisano T, Tanaka T, Tanaka R, Arima T, Yamashita A, Sugahara M, Naitow H, Matsuura Y, Yoshizawa S, Tono K, Owada S, Nureki O, Kimura-Someya T, Iwata S, *Nango E, *Shirouzu M.
Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers
Proc Natl Acad Sci U S A , 119 , 9 , e2117433119 (2022)
DOI: https://doi.org/10.1073/pnas.2117433119
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2022-02-28-2
A01: B01: C01: A01:2020 A01 So Iwata B01 Eriko Nango B01 Sigeki Owada C01 Minoru Kubo A01 Toshiaki Hosaka
Rei Matsuoka, Roman Fudim, Sukkyeong Jung, Chenou Zhang, Andre Bazzone, Yurie Chatzikyriakidou, Carol V. Robinson, Norimichi Nomura, So Iwata, Michael Landreh, Laura Orellana, Oliver Beckstein, David Drew
Structure, mechanism and lipid-mediated remodeling of the mammalian Na+/H+ exchanger NHA2
Nature Structural & Molecular Biology , 29 , 2 , 108-120 (2022)
DOI: 10.1038/s41594-022-00738-2
A01: A01 So Iwata A01 Norimichi Nomura
Koichiro E. Kishi, Yoon Seok Kim, Masahiro Fukuda, Masatoshi Inoue, Tsukasa Kusakizako, Peter Y. Wang, Charu Ramakrishnan, Eamon F.X. Byrne, Elina Thadhani, Joseph M. Paggi, Toshiki E. Matsui, Keitaro Yamashita, Takashi Nagata, Masae Konno, Sean Quirin, Maisie Lo, Tyler Benster, Tomoko Uemura, Kehong Liu, Mikihiro Shibata, Norimichi Nomura, So Iwata, Osamu Nureki, Ron O. Dror, Keiichi Inoue, Karl Deisseroth, Hideaki E. Kato
Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine
Cell , 185 , 4 , 672-689 (2022)
DOI: 10.1016/j.cell.2022.01.007
プレスリリース: https://www.u-tokyo.ac.jp/focus/ja/press/z0109_00034.html
A01: A01 So Iwata A01 Norimichi Nomura A01 Tsukasa Kusakizako A01 Keitaro Yamashita
Pan D, Oyama R, Sato T, Nakane T, Mizunuma R, Matsuoka K, Joti Y, Tono K, Nango E, Iwata S, Nakatsu T and *Kato H.
Crystal structure of CmABCB1 multi-drug exporter in lipidic mesophase revealed by LCP-SFX
IUCrJ. , 9 , 1 (2021)
DOI: https://doi.org/10.1107/S2052252521011611
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2021-12-23
A01: B01: A01 So Iwata A01 Toru Nakatsu B01 Eriko Nango
*Katayama K, Suzuki K, Suno R, Kise R, Tsujimoto H, Iwata S, Inoue A, Kobayashi T & *Kandori H.
Vibrational spectroscopy analysis of ligand efficacy in human M2 muscarinic acetylcholine receptor (M2R)
Communications Biology , 4 , 1321 (2021)
DOI: https://doi.org/10.1038/s42003-021-02836-1
プレスリリース: https://www.nitech.ac.jp/news/press/2021/9297.html
A01: A01:2020 A01 So Iwata A01 Kota Katayama
1. *Murakaw T, Suzuki M, Arima T, Sugahara M, Tanaka T, Tanaka R, Iwata S, Nango E, Tono K, Hayashi H, Fukui K, Yano T, Tanizawah K and *Okajima T.
Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
Acta Crystallographica Section F. , 77 (2021)
DOI: https://doi.org/10.1107/S2053230X21008967
A01: B01: A01:2020 A01 So Iwata B01 Eriko Nango A01 Takeshi Murakawa
Dmitry Ghilarov, Satomi Inaba-Inoue, Piotr Stepien, Feng Qu, Elizabeth Michalczyk, Zuzanna Pakosz, Norimichi Nomura, Satoshi Ogasawara, Graham Charles Walker, Sylvie Rebuffat, So Iwata, Jonathan Gardiner Heddle, Konstantinos Beis
Molecular mechanism of SbmA, a promiscuous transporter exploited by antimicrobial peptides
Science Advances , 7 , 37 , abj5363 (2021)
DOI: 10.1126/sciadv.abj5363
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2021-09-09-0
A01: A01 So Iwata A01 Norimichi Nomura
Hiroyuki H. Okamoto, Hirotake Miyauchi, Asuka Inoue, Francesco Raimondi, Hirokazu Tsujimoto, Tsukasa Kusakizako, Wataru Shihoya, Keitaro Yamashita, Ryoji Suno, Norimichi Nomura, Takuya Kobayashi, So Iwata, Tomohiro Nishizawa, Osamu Nureki
Cryo-EM structure of the human MT1–Gi signaling complex
Nature Structural & Molecular Biology , 28 (2021)
DOI: 10.1038/s41594-021-00634-1
プレスリリース: https://www.s.u-tokyo.ac.jp/ja/info/7508/
A01: A01:2020 A01 So Iwata A01 Norimichi Nomura A01 Tsukasa Kusakizako A01 Keitaro Yamashita A01 Wataru Shihoya
Shingo Nojima, Yoko Fujita, Kanako Terakado Kimura, Norimichi Nomura, Ryoji Suno, Kazushi Morimoto, Masaki Yamamoto, Takeshi Noda, So Iwata, Hideki Shigematsu, Takuya Kobayashi
Cryo-EM Structure of the Prostaglandin E Receptor EP4 Coupled to G Protein
Structure , 29 , 3 , 252-260 (2021)
DOI: 10.1016/j.str.2020.11.007
A01: B01: A01 So Iwata A01 Norimichi Nomura B01 Masaki Yamamoto
Stephanie L. Neville, Jennie Sjöhamn, Jacinta A. Watts, Hugo MacDermott-Opeskin, Stephen J. Fairweather, Katherine Ganio, Alex Carey Hulyer, Aaron P. McGrath, Andrew J. Hayes, Tess R. Malcolm, Mark R. Davies, Norimichi Nomura, So Iwata, Megan L. O’Mara, Megan J. Maher, Christopher A. McDevitt
The structural basis of bacterial manganese import
Science Advances , 7 , 32 , eabg3980 (2021)
DOI: 10.1126/sciadv.abg3980
A01: A01 So Iwata A01 Norimichi Nomura
Oda K, Nomura T, Nakane T, Yamashita K, Inoue K, Ito S, Vierock J, Hirata K, Maturana AD, Katayama K, Ikuta T, Ishigami I, Izume T, Umeda R, Eguma R, Oishi S, Kasuya G, Kato T, Kusakizako T, Shihoya W, Shimada H, Takatsuji T, Takemoto M, Taniguchi R, Tomita A, Nakamura R, Fukuda M, Miyauchi H, Lee Y, Nango E, Tanaka R, Tanaka T, Sugahara M, Kimura T, Shimamura T, Fujiwara T, Yamanaka Y, Owada S, Joti Y, Tono K, Ishitani R, Hayashi S, Kandori H, Hegemann P, Iwata S, Kubo M, Nishizawa T, Nureki O.
Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin
elife , 23 , e62389 (2021)
DOI: 10.7554/eLife.62389
プレスリリース: https://www.s.u-tokyo.ac.jp/ja/press/2021/7284/
A01: B01: C01: A01:2020 C01:2020 A01 So Iwata A01 Tsukasa Kusakizako B01 Eriko Nango B01 Sigeki Owada C01 Minoru Kubo C01 Tetsunari Kimura A01 Wataru Shihoya A01 Kota Katayama C01 Shigehiko Hayashi
Jin F, Sun M, Fujii T, Yamada Y, Wang J, Maturana AD, Wada M, Su S, Ma J, Takeda H, Kusakizako T, Tomita A, Nakada-Nakura Y, Liu K, Uemura T, Nomura Y, Nomura N, Ito K, Nureki O, Namba K, Iwata S, Yu Y, Hattori M
The structure of MgtE in the absence of magnesium provides new insights into channel gating
PLOS Biology , 19 , 4 , e3001231 (2021)
DOI: 10.1371/journal.pbio.3001231
A01: A01 So Iwata A01 Norimichi Nomura
Matoba K, Kotani T, Tsutsumi A, Tsuji T, Mori T, Noshiro D, Sugita Y, Nomura N, Iwata S, Ohsumi Y, Fujimoto T, Nakatogawa H, Kikkawa M, Noda NN
Atg9 is a lipid scramblase that mediates autophagosomal membrane expansion
Nature Structural & Molecular Biology , 27 , 1185-1193 (2020)
DOI: 10.1038/s41594-020-00518-w
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2020-10-28
A01: A01 So Iwata A01 Norimichi Nomura
Umeda R, Satouh Y, Takemoto M, Nakada-Nakura Y, Liu K, Yokoyama T, Shirouzu M, Iwata S, Nomura N, Sato K, Ikawa M, Nishizawa T, Nureki O
Structural insights into tetraspanin CD9 function
Nature Communications , 11 , 1606 (2020)
DOI: 10.1038/s41467-020-15459-7
A01: A01 So Iwata A01 Norimichi Nomura
Asada H, Inoue A, Ngako Kadji FM, Hirata K, Shiimura Y, Im D, Shimamura T, Nomura N, Iwanari H, Hamakubo T, Kusano-Arai O, Hisano H, Uemura T, Suno C, Aoki J and Iwata S
The crystal structure of angiotensin II type 2 receptor with endogenous peptide hormone
Structure , 28 , 4 , 418-425 (2020)
DOI: 10.1016/j.str.2019.12.003
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2020-01-22-1
A01: A01 So Iwata A01 Norimichi Nomura
Kinjo T, Terai K, Horita S, Nomura N, Sumiyama K, Togashi K, Iwata S and Matsuda M.
FRET-assisted photoactivation of flavoproteins for in vivo two-photon optogenetics
Nature Methods , 16 , 1029-1036 (2019)
DOI: 10.1038/s41592-019-0541-5
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2019-09-10
A01: A01 So Iwata A01 Norimichi Nomura
Toyomoto M, Inoue A, Iida K, Denawa M, Kii I, Ngako Kadji FM, Kishi T, Im D, Shimamura T, Onogi H, Yoshida S, Iwata S, Aoki J, Hosoya T, Hagiwara M.
S1PR3-G 12-biased agonist ALESIA targets cancer metabolism and promotes glucose starvation
Cell Chem Biol. , 28 , 1-13 (2021)
DOI: 10.1016/j.chembiol.2021.01.004.
A01: A01 So Iwata
Im D, Inoue A, Fujiwara T, Nakane T, Yamanaka Y, Uemura T, Mori C, Shiimura Y, Kimura KT, Asada H, Nomura N, Tanaka T, Yamashita A, Nango E, Tono K, Kadji FMN, Aoki J, Iwata S and Shimamura T.
Structure of the dopamine D2 receptor in complex with the antipsychotic drug spiperone
Nat Commun. , 11 , 1 , 6442 (2020)
DOI: 10.1038/s41467-020-20221-0
プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2020-12-24-2
A01: B01: A01 So Iwata A01 Norimichi Nomura B01 Eriko Nango
Wolff, A. M., Young, I. D., Sierra, R. G., Brewster, A. S., Martynowycz, M. W., Nango, E., Sugahara, M., Nakane, T., Ito, K., Aquila, A., Bhowmick, A., Biel, J. T., Carbajo, S., Cohen, A. E., Cortez, S., Gonzalez, A., Hino, T., Im, D., Koralek, J. D., Kubo, M., Lazarou, T. S., Nomura, T., Owada, S., Samelson, A. J., Tanaka, T., Tanaka, R., Thompson, E. M., van den Bedem, H., Woldeyes, R. A., Yumoto, F., Zhao, W., Tono, K., Boutet, S., Iwata, S., Gonen, T., Sauter, N. K., Fraser, J. S., Thompson, M. C.
Comparing serial X-ray crystallography and microcrystal electron diffraction (MicroED) as methods for routine structure determination from small macromolecular crystals.
IUCrJ , 7 , 2 , 306-323 (2020)
DOI: https://doi.org/10.1107/S205225252000072X
A01: B01: C01: C01:2020 A01 So Iwata B01 Eriko Nango B01 Sigeki Owada C01 Minoru Kubo A01 Tomoya Hino

書籍Books

Nomura N, Nomura Y, Sato Y and Iwata S
Methods in Molecular Biology, Vol. 2247 “Multiprotein Complexes"
Springer page: 77-103 (2021)
A01: A01 So Iwata A01 Norimichi Nomura
Nomura N, Nomura Y, Sato Y and Iwata S
Methods in Enzymology, Vol. 629, "Tumor Immunology and Immunotherapy – Molecular Methods" (Edited by Lorenzo Galluzzi, Nils-Petter Rudqvist)
Academic Press page: 383-399 (2019)
A01: A01 So Iwata A01 Norimichi Nomura
Raymond G. Sierra, Uwe Weierstall, Dominik Oberthuer, Michihiro Sugahara, Eriko Nango, So Iwata and Alke Meents.
X-ray Free Electron Lasers - A Revolution in Structural Biology.
Springer page: 109-184 (2019)
A01: B01: A01 So Iwata B01 Eriko Nango

学会発表Presentations, Lectures

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