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研究成果

謝辞の記載についてAcknowledgement remarks

雑誌論文Papers

  1. Hosaka T, Nomura T, Kubo M, Nakane T, Fangjia L, Sekine SI, Ito T, Murayama K, Ihara K, Ehara H, Kashiwagi K, Katsura K, Akasaka R, Hisano T, Tanaka T, Tanaka R, Arima T, Yamashita A, Sugahara M, Naitow H, Matsuura Y, Yoshizawa S, Tono K, Owada S, Nureki O, Kimura-Someya T, Iwata S, *Nango E, *Shirouzu M.
    Conformational alterations in unidirectional ion transport of a light-driven chloride pump revealed using X-ray free electron lasers
    Proc Natl Acad Sci U S A , 119 , 9 , e2117433119 (2022)
    DOI: https://doi.org/10.1073/pnas.2117433119
    プレスリリース: https://www.kyoto-u.ac.jp/ja/research-news/2022-02-28-2
    A01:計画研究  B01:計画研究  C01:計画研究  A01:2020年公募班   A01 岩田 想  B01 南後 恵理子  B01 大和田 成起  C01 久保 稔  A01 保坂 俊彰  
  2. Kiichi Hirazawa, Michihiro Tateyama, Yoshihiro Kubo, Takushi Shimomura,
    Phosphoinositide regulates dynamic movement of the S4 voltage sensor in the second repeat in two-pore channel 3
    J Biol Chem. , 297 , 6 , 101425 (2021)
    DOI: 10.1016/j.jbc.2021.101425
    A01:2020年公募班   A01 下村 拓史  
  3. *Katayama K, Suzuki K, Suno R, Kise R, Tsujimoto H, Iwata S, Inoue A, Kobayashi T & *Kandori H.
    Vibrational spectroscopy analysis of ligand efficacy in human M2 muscarinic acetylcholine receptor (M2R)
    Communications Biology , 4 , 1321 (2021)
    DOI: https://doi.org/10.1038/s42003-021-02836-1
    プレスリリース: https://www.nitech.ac.jp/news/press/2021/9297.html
    A01:計画研究  A01:2020年公募班   A01 岩田 想  A01 片山 耕大  
  4. 1. *Murakaw T, Suzuki M, Arima T, Sugahara M, Tanaka T, Tanaka R, Iwata S, Nango E, Tono K, Hayashi H, Fukui K, Yano T, Tanizawah K and *Okajima T.
    Microcrystal preparation for serial femtosecond X-ray crystallography of bacterial copper amine oxidase
    Acta Crystallographica Section F. , 77 (2021)
    DOI: https://doi.org/10.1107/S2053230X21008967
    A01:計画研究  B01:計画研究  A01:2020年公募班   A01 岩田 想  B01 南後 恵理子  A01 村川 武志  
  5. Hiroyuki H. Okamoto, Hirotake Miyauchi, Asuka Inoue, Francesco Raimondi, Hirokazu Tsujimoto, Tsukasa Kusakizako, Wataru Shihoya, Keitaro Yamashita, Ryoji Suno, Norimichi Nomura, Takuya Kobayashi, So Iwata, Tomohiro Nishizawa, Osamu Nureki
    Cryo-EM structure of the human MT1–Gi signaling complex
    Nature Structural & Molecular Biology , 28 (2021)
    DOI: 10.1038/s41594-021-00634-1
    プレスリリース: https://www.s.u-tokyo.ac.jp/ja/info/7508/
    A01:計画研究  A01:2020年公募班   A01 岩田 想  A01 野村 紀通  A01 草木迫 司  A01 山下 恵太郎  A01 志甫谷 渉  
  6. Fujiyama K, Kato N, Re S, Kinugasa K, Watanabe K, Takita R, Nogawa T, Hino T, Osada H, Sugita Y, Takahashi S, Nagano S.
    Molecular basis for two stereoselective Diels-Alderases that produce decalin skeletons.
    Angew Chem Int Ed. (2021)
    DOI: https://doi.org/10.1002/anie.202106186
    プレスリリース: https://www.tottori-u.ac.jp/item/18745.htm
    A01:計画研究  A01:2020年公募班   A01 永野 真吾  A01 日野 智也  
  7. Demura K, Kusakizako T, Shihoya W, Hiraizumi M, Nomura K, Shimada H, Yamashita K, Nishizawa T, Taruno A, Nureki O.
    Cryo-EM structures of calcium homeostasis modulator channels in diverse oligomeric assemblies
    Sci Adv. , 6 , 29 , eaba8105 (2020)
    DOI: 10.1126/sciadv.aba8105.
    A01:計画研究  A01:2020年公募班   A01 草木迫 司  A01 志甫谷 渉  
  8. Fukuhara S, Kobayashi K, Kusakizako T, Iida W, Kato M, Shihoya W, Nureki O.
    Structure of the human secretin receptor coupled to an engineered heterotrimeric G protein
    Biochem Biophys Res Commun , 533 , 4 , 861-866 (2020)
    DOI: 10.1016/j.bbrc.2020.08.042.
    A01:計画研究  A01:2020年公募班   A01 草木迫 司  A01 志甫谷 渉  
  9. Oda K, Nomura T, Nakane T, Yamashita K, Inoue K, Ito S, Vierock J, Hirata K, Maturana AD, Katayama K, Ikuta T, Ishigami I, Izume T, Umeda R, Eguma R, Oishi S, Kasuya G, Kato T, Kusakizako T, Shihoya W, Shimada H, Takatsuji T, Takemoto M, Taniguchi R, Tomita A, Nakamura R, Fukuda M, Miyauchi H, Lee Y, Nango E, Tanaka R, Tanaka T, Sugahara M, Kimura T, Shimamura T, Fujiwara T, Yamanaka Y, Owada S, Joti Y, Tono K, Ishitani R, Hayashi S, Kandori H, Hegemann P, Iwata S, Kubo M, Nishizawa T, Nureki O.
    Time-resolved serial femtosecond crystallography reveals early structural changes in channelrhodopsin
    elife , 23 , e62389 (2021)
    DOI: 10.7554/eLife.62389
    プレスリリース: https://www.s.u-tokyo.ac.jp/ja/press/2021/7284/
    A01:計画研究  B01:計画研究  C01:計画研究  A01:2020年公募班  C01:2020年公募班   A01 岩田 想  A01 草木迫 司  B01 南後 恵理子  B01 大和田 成起  C01 久保 稔  C01 木村 哲就  A01 志甫谷 渉  A01 片山 耕大  C01 林 重彦  
  10. Tatsuki Tanaka, Manish Singh, Wataru Shihoya, Keitaro Yamashita, Hideki Kandori, Osamu Nureki
    Structural basis for unique color tuning mechanism in heliorhodopsin
    Biochem Biophys Res Commun , 533 , 3 , 262-267 (2020)
    DOI: 10.1016/j.bbrc.2020.06.124
    A01:2020年公募班   A01 志甫谷 渉  
  11. Akimitsu Higuchi, Wataru Shihoya, Masae Konno, Tatsuya Ikuta, Hideki Kandori, Keiichi Inoue, Osamu Nureki
    Crystal structure of schizorhodopsin reveals mechanism of inward proton pumping
    Proceedings of the National Academy of Sciences of the United States of America , 118 , 14 , e2016328118 (2021)
    DOI: https://doi.org/10.1073/pnas.2016328118
    プレスリリース: https://www.s.u-tokyo.ac.jp/ja/press/2021/7261/
    A01:2020年公募班   A01 志甫谷 渉  
  12. Takahashi S, Nambu S, Matsui T, Fujii H, Ishikawa H, Mizutani Y, Tsumoto K, Ikeda-Saito M.
    Unique Electronic Structures of the Highly Ruffled Hemes in Heme-Degrading Enzymes of Staphylococcus aureus, IsdG and IsdI, by Resonance Raman and Electron Paramagnetic Resonance Spectroscopies.
    Biochemistry , 59 , 40 , 3918-3928 (2020)
    DOI: 10.1021/acs.biochem.0c00731
    A01:2020年公募班   A01 松井 敏高  
  13. Kazuki Matsumura, Takushi Shimomura, Yoshihiro Kubo, Takayuki Oka, Naohiro Kobayashi, Shunsuke Imai, Naomi Yanase, Madoka Akimoto, Masahiro Fukuda, Mariko Yokogawa, Kazuyoshi Ikeda, Jun-Ichi Kurita, Yoshifumi Nishimura, Ichio Shimada, Masanori Osawa
    Mechanism of hERG inhibition by gating-modifier toxin, APETx1, deduced by functional characterization
    BMC Mol Cell Biol. , 22 , 3 (2021)
    DOI: https://doi.org/10.1186/s12860-020-00337-3
    A01:2020年公募班   A01 下村 拓史  
  14. Takeda, H., Kimura, T., Nomura, T., Horitani, M., Yokota, A., Matsubayashi, A., Ishii, S., Shiro, Y., Kubo, M., Tosha, T.
    Timing of NO Binding and Protonation in the Catalytic Reaction of Bacterial Nitric Oxide Reductase as Established by Time-Resolved Spectroscopy.
    Bull. Chem. Soc. Japan , 93 , 7 , 825-833 (2020)
    DOI: https://doi.org/10.1246/bcsj.20200038
    C01:計画研究  A01:2020年公募班   C01 久保 稔  C01 木村 哲就  A01 當舎 武彦  
  15. Suga, M., Akita, F., Yamashita, K., Nakajima, Y., Ueno, G., Li, H., Yamane, T., Hirata, K., Umena, Y., Yonekura, S., Yu, L.-J., Murakami, H., Nomura, T., Kimura, T., Kubo, M., Baba, S., Kumasaka, T., Tono, K., Yabashi, M., Isobe, H., Yamaguchi, K. Yamamoto, M., Ago, H., Shen, J.-R.
    An oxyl/oxo mechanism for oxygen-oxygen coupling in PSII revealed by an X-ray free electron laser.
    Science , 366 , 6463 , 334-338 (2019)
    DOI: 10.1126/science.aax6998
    A01:計画研究  B01:計画研究  C01:計画研究  A01:2020年公募班   A01 梅名 泰史  B01 山本 雅貴  B01 熊坂 崇  C01 久保 稔  C01 木村 哲就  A01 菅 倫寛  
  16. Tatsuya Ikuta, Wataru Shihoya, Masahiro Sugiura, Kazuho Yoshida, Masahito Watari, Takaya Tokano, Keitaro Yamashita, Kota Katayama, Satoshi P. Tsunoda, Takayuki Uchihashi, Hideki Kandori & Osamu Nureki
    Structural insights into the mechanism of rhodopsin phosphodiesterase
    Nature Communications , 11 , 5605 (2020)
    DOI: doi: 10.1038/s41467-020-19376-7
    プレスリリース: https://www.s.u-tokyo.ac.jp/ja/press/2020/7094/
    A01:2020年公募班   A01 志甫谷 渉  A01 片山 耕大  
  17. H. Shimada, T. Kusakizako, T. H. D. Nguyen, T. Nishizawa, T. Hino, M. Tominaga and O. Nureki.
    The structure of lipid nanodisc-reconstituted TRPV3 reveals the gating mechanism
    Nature Struct. Mol. Biol. (2020)
    DOI: https://doi.org/10.1038/s41594-020-0439-z
    A01:2020年公募班   A01 日野 智也  

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